BioWare
From BITS wiki
Software used for the analysis of Biological data in the broad acceptation.
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The list below is automatically created based on all pages with the label: 'Bioware'
- Annovar
- AWK
- BamUtils
- Bcftools
- BEDOps
- Bedtools
- Bfast
- Blat
- Bowtie
- Bowtie2
- Breakdancer
- Bwa
- Cuffdiff
- Cufflinks
- Cuffmerge
- Cutadapt
- F-Seq
- FastQC
- FastX toolkit
- Filo
- GATK
- HTSeq
- MACS
- MACS2
- NGSRich
- NGSUtils
- PeakAnalyzer
- PrinSeq
- Qstats
- Qualimap
- RDXplorer
- RSeQC
- Samtools
- Seq crumbs
- SERE
- SnpEff and SnpSift
- SRA-toolkit
- SVMerge
- Tabutils
- Tophat
- Trimmomatic
- Varscan2
- VcfCodingSnps
- VCFtools
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