Workflow tools

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If you have to run repetitive bioinformatics tasks, clever tools exists to help you automate things:

  • Galaxy - Pipelines - focus on bioinformatics - open source
  • Taverna - Powerful workflows - versatile - open source
  • Pipeline Pilot - commercial
  • Ergatis - focus on bioinformatics - open source
  • Knime - powerful workflows - versatile - open source
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