## Setup script for course Introduction to R and Bioconductor for gene ## expression analysis ## ## Alexander.Ploner@ki.se 2010-10-12 ## Install biocLite source("http://bioconductor.org/biocLite.R") biocLite() ## Extra packages from Bioconductor pl = c("GEOquery", "hgu95av2cdf", "arrayQualityMetrics", "beadarray", "matchprobes", "estrogen", "hgu133a.db", "hgu133acdf", "hgu133b.db", "moe430a.db", "hgu133bcdf", "org.Mm.eg.db", "org.Sc.sgd.db", "affycoretools", "siggenes", "ALLMLL", "ALL", "golubEsets", "CLL", "ecoliLeucine", "ecolicdf", "fibroEset", "ArrayExpress", "limmaGUI", "affylmGUI", "Heatplus") biocLite(pl)